Is there a way that I can call .save() on a model that will make sequential save calls, so I don’t run into these time limits?

I have a model where 6000+ rows have changes… Any way to just save some rows? and then save some more?

I believe that is the error I got on an Apex Async Job that brought in data from an external data source. We broke the job into three separate jobs and it fixed the problem (as I remember). That obviously doesn’t help you with Skuid. Sorry…

Did you ever figure out how to perform model saves in a partial or sequential manner?

No.

Instead of changing all 6000+ rows at once, we just change a few, save, query again, change, save, etc…